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frezik, in Scientists discover first new antibiotics in over 60 years using AI

Great. Now don’t overuse it again.

Sirico, in Scientists discover first new antibiotics in over 60 years using AI

Quick to the beef depository!

Guajojo, in Scientists discover first new antibiotics in over 60 years using AI

First Check if it doesn’t make our fingers merge into a stub

JiveTurkey, in Scientists successfully replicate historic nuclear fusion breakthrough three times

Article is misleading and basically bullshit.

Aatube,
@Aatube@kbin.social avatar

How?

robdor,

Well you take a few of the letters out of the title and you can spell bullshit. I guess?

Fermion,

Maybe they’re upset that this isn’t an independent replication by a different group? It’s the same facility and group reporting these results because this machine is truly one of a kind.

JiveTurkey,
Aatube, (edited )
@Aatube@kbin.social avatar

Hmm, so it basically quotes https://www.theguardian.com/world/2022/dec/14/first-edition-nuclear-fusion , which among other things says that the energy produced by the thing is currently unusable (which is what the video quotes at 9:00)

Still feels like a breakthrough

They’ve sort of” – you can hear the pain of this simplification in Bluck’s voice as he speaks – “solved the physics issues, and now they’re looking squarely at the engineering issues.”

jose1324,

Sounds like every article about fusion ngl

whaleross, in Scientists successfully replicate historic nuclear fusion breakthrough three times
@whaleross@lemmy.world avatar

Huh. So I guess fusion is only 20 years away.

Viking_Hippie,

Always.

LostXOR,

Give it another 20 years, maybe it'll only be 15 years away then!

MaximilianKohler, in Scientists discover first new antibiotics in over 60 years using AI

I guess all the people solely cheering for this aren’t aware of the damage we’ve been doing to ourselves with antibiotics:

While antibiotic resistance gets all the attention, the damage being done to our host-native microbiomes is arguably as big a threat as climate change, as the damage compounds over generations, and once it’s gone you can’t get it back. (Apr 2019).

Resistance may already be a solved problem: humanmicrobiome.info/antibiotics/-to-counter-…

DarkroomDoc,

This is a simplified to the point of absurdity comment. Microbiome is important, but is absolutely not enough to prevent antibiotic resistance.

MaximilianKohler,

That is simply wrong. I wonder what gives you the courage to make such boldly false statements?

DarkroomDoc,

My medical degree, internship, residency, and years practicing as a doctor.

SCB,

So nothing relevant to the discussion. Got it.

MaximilianKohler,

All that and yet your statement contradicts the plethora of citations that were provided, without providing any support yourself.

DarkroomDoc,

If you spent more than 3 seconds reading what you post, you’d realize that fecal transplant only affects the gut microbiome, not body-wide resistance. Fecal transplant, obviously, does nothing to combat pneumonia, skin infections, abscesses, or literally anywhere other than the gut. As the vast majority of fatal or life threatening infections are not isolated to the gut, your argument fails. But I need not argue against citations, as the provided papers don’t even argue your point.

MaximilianKohler,

That’s not true. The gut microbiome regulates the entire body, including other body site’s microbiomes. This information is included in the links I shared. Here is a specific page that covers it humanmicrobiome.info/systemic/ but there’s more in the rest of the wiki as well.

NAK,

Bacterial infections can kill people.

Don’t be stupid

MaximilianKohler, (edited )

A perfect example of the black and white thinking that has caused so much harm.

humanmicrobiome.info/antibiotics/-ove…

NAK,

If the choice between giving someone life saving antibiotics or disrupting their gut microbiom until they eat some yogurt, that’s an easy choice.

False equivalency is what you’re doing, btw

MaximilianKohler,

What you just said is harmful misinformation and 100% demonstrates that you didn’t read a damn thing that you’re responding to and acting like you’re an expert on.

NAK,

It isn’t, and a random website isn’t a source

If you have an article from a medical journal, or a study with a sample size of over 1,000 diverse participants I’ll happily read that.

I could make a website that contradicts everything in the one you linked and host that for free.

Antibiotics save lives. Vaccines save lives. They are good things.

MaximilianKohler,

It isn’t, and a random website isn’t a source

So you clearly don’t understand how citations work. You shouldn’t even be engaging in discussions like this until you do.

If you have an article from a medical journal, or a study with a sample size of over 1,000 diverse participants I’ll happily read that.

Once again proving that you didn’t read anything you’re arguing about. You need to reassess your behavior.

Antibiotics save lives. Vaccines save lives. They are good things.

False dichotomy, further demonstrating your cluelessness.

NAK, (edited )

I know I’m not going to convince you, and that’s fine, but people like you get other people killed.

Steve Jobs infamously had a treatable form of cancer, but instead of going to a doctor and doing the scientifically verified treatment he ate fruit that some nut job said would cure him and he died.

The only medical advice anyone should ever give is go to a doctor. That’s it. Period. The end.

MaximilianKohler, (edited )

people like you get other people killed

Trippling down on your pigheaded ignorance to the point where you’re now projecting all your errors and flaws outward.

Steve Jobs infamously had a treatable form of cancer, but instead of going to a doctor and doing the scientifically verified treatment he ate fruit that some nut job said would cure him and he died.

Once again, a false dichotomy, demonstrating an inability of critical thinking and ability to differentiate shades of color.

The only medical advice anyone should ever give is go to a doctor.

This would apply well to YOU, because YOU clearly have no clue what you’re talking about. Yet you violated your own policy. You should have stayed quiet on this topic which you clearly know nothing about.

And FYI, that is unfortunately not valid for everyone to abide by: …humanmicrobiome.info/…/doctors-are-not-systemati…

I know I’m not going to convince you

Yes, you would need actual knowledge and scientific citations to do that. Something you’re clearly devoid of.

NAK,

My stance is consistent, clear, and concise. Medical decisions should be made by doctors.

Just so everyone reading this knows what your stance is, can you make that clear? So far I’ve heard nothing but contrarianism.

MaximilianKohler,

So far I’ve heard nothing but contrarianism.

Projecting again. I was the one who started off by sharing information and you were the one who contradicted it.

Just so everyone reading this knows what your stance is, can you make that clear?

It is clear to anyone with the ability to click links and read the contents. It’s only unclear to you since you opted not to do that.

NAK, (edited )

You’ve linked a lot of other people’s opinions, which is fine. A lot of stuff about how doctors aren’t always right, diagnoses aren’t always correct, and how antibiotics are prescribed in situations that aren’t necessary, like viral infections, which agreed, all of that happens.

But the context you’re avoiding is your original claim.

While antibiotic resistance gets all the attention, the damage being done to our host-native microbiomes is arguably as big a threat as climate change, as the damage compounds over generations, and once it’s gone you can’t get it back. (Apr 2019).

It is beyond ridiculous and what started this whole thing.

So, again, for everyone reading, my claim is that doctors should be the ones to make medical decisions. Antibiotics save lives, and to add one more, people who advocate for their disuse because humans make mistakes, should rightfully be called out.

And since you’re such a fan of random website “sources”.

jennymccarthybodycount.com

Never forget anti vaxxers, and anti medicine people in general, are responsible for hundreds of thousands of preventable deaths.

MaximilianKohler,

It is beyond ridiculous and what started this whole thing.

It’s not. A plethora of supporting citations were provided.

And yet again, you continue with your false equivalency of anti-vax and anti-antibiotic.

NAK,

Buddy, I get it. You’re campaigning against antibiotic overuse. That’s true. Antibiotics are over prescribed. I’ve never said they weren’t.

What you need to chill on is giving people medical advice. I took a look at your post history, and this is a topic you’re clearly passionate about

But you are not a doctor. You are not even in the medical field. It looks like you’re an IT nerd. Which is great. We need nerds

But you espousing your opinions can hurt people. There are countless examples of people rejecting medicine that works, for essentially folk cures that do not. People die. Children are one of the most vulnerable to this, and I have personal experience with kids suffering because of people like you, campaigning against western medicine, convincing impressionable morons that alternative medicine works.

You are not a doctor, medical researcher, or a scientist researching bacterial diseases. You are a person reading what other people write on the Internet, and fixating on the gut biome above all other things is simply the wrong way to look at this.

Antibiotics save lives.

MaximilianKohler,

What you need to chill on is giving people medical advice.

you espousing your opinions can hurt people.

You are not a doctor, medical researcher, or a scientist researching bacterial diseases.

Projecting again. Also some random bold and baseless claims.

I have personal experience with people suffering because of people like you.

NAK,

I checked again, and you’re fighting this fight with a lot of people.

Why? What’s your personal experience?

MaximilianKohler,

My personal experience is irrelevant. I’m fighting with many people because many people are making harmful, false statements.

NAK,

You can’t even say antibiotics save lives.

Of course your personal experience is what we’re talking about.

Red_October, in Scientists discover first new antibiotics in over 60 years using AI

Finally a good use of AI, instead of using it to replace artists.

zik,

Yeah but think of all the bacteria it’s putting out of work.

Sorgan71,

most artists deserve to be replaced

Telodzrum,

The one uniquely human product in all of the planet’s history? Yeah, ok.

Sorgan71,

thats not true.

Kiwi_Girl, in Scientists discover first new antibiotics in over 60 years using AI
@Kiwi_Girl@lemmy.blahaj.zone avatar

This AI thing would be excellent at hide and seek.

HeyThisIsntTheYMCA, in Scientists discover first new antibiotics in over 60 years using AI
@HeyThisIsntTheYMCA@lemmy.world avatar

Ooo, a new allergy!

FlyingSquid,
@FlyingSquid@lemmy.world avatar

My dad was allergic to practically every antibiotic. He only developed the allergy in his senior years. It was a big problem for him. Even if the antibiotic seemed to be working okay, he had to take a lot of Benadryl just in case and keep an epi pen around.

Smoogs, (edited )

It’s very common as you hit a second puberty and you’re body is suddenly like ‘nah’.

It’s like a warranty is up or something.

FlyingSquid,
@FlyingSquid@lemmy.world avatar

Thankfully, my mother doesn’t seem to have this problem. She’s 81, so if she hasn’t developed it yet, I don’t think she’s going to. Really sucked for my dad though.

squeezeyerbawdy, in 5 wolves released in Colorado as part of reintroduction plan

Woooves come and the trump goes out, wooves come in and the trump goes out - 🐺👏👏👏

chiliedogg, in 5 wolves released in Colorado as part of reintroduction plan

I’d be more excited about this id I wasn’t 100% sure people will be shooting these wolves.

CrayonMaster,

I mean it worked in Wyoming didn’t it?

ChicoSuave, in Scientists discover first new antibiotics in over 60 years using AI

Does this AI use the same process for piecing together things as LLMs do for art and writing? Is this a drug we have known about but not yet applied as an antibiotic or a whole new compound?

krellor,

It doesn't sound like it but they don't have enough detail in the article to say.

It sounds likey they are using a classification model that takes a vectorized text representation of molecules and classifies or scores them by their expected properties/reactivity. They took 39,000 molecules with known reactivity to MRSA to train the model, I assume to classify the structures. Once trained they can feed in arbitrary molecules into the trained model and see which ones are predicted to have antibiotic properties, which they can verify with bench work.

They likely fed in molecules from classes of likely candidate structures, and the model helped focus and direct the wet work.

I'm not up on the latest, but years ago I helped a similar project using FPGAs running statistical models to direct lab work.

Jerkface,

I’d be interested to know why FPGAs were selected for this application. I’m not especially familiar with their use cases.

thallamabond,

Don’t know why they chose them, but I do know they’re used in cartridge emulation for older consoles.

Wikipedia says they’re great at simulation and parallel processing, which works great here.

…m.wikipedia.org/…/Field-programmable_gate_array

krellor,

This was years ago before GPU processing really took off, and we wanted the performance, but also, wanted to see if we could develop an affordable discrete lab device that could be placed in labs to aid in computationally directed bench work. So effectively, testing the efficacy of the models and designing ASICs to perform lab tests.

1rre, (edited )

With a CPU or even a GPU, there is a bunch of inefficiencies for every task as they’re designed to be able to do pretty much anything - your H265 media decoder isn’t going to be doing much when you’re keeping a running sum of the number of a certain type of bond in a list of chemicals

With ASICs and a lesser extent FPGAs, you can make it so every single transistor is being used at every moment which makes them wildly efficient for doing a single repetitive task, such as running statistical analysis on a huge dataset. This is because rather than being limited by the multiprocessing ability of the CPU or GPU, you can design the “program” to run with as much multiprocessing ability as is possible based on the program, meaning if you stream one input per clock cycle, after a delay you will get one input per clock cycle out, including your update function so long as it’s simple enough (eg moving average, running sum or even just writing to memory)

This is one specific application of FPGAs (static streaming) but it’s the one that’s relevant here

Jerkface,

So it sounds like we’re designing the instruction pipeline for maximum parallelism for our task. I was surprised to learn that the first commercial FPGAs were available as early as the '80s. I can see how this would have been an extremely effective option before CUDA became available.

Willy,

llms have progressed beyond cut and paste way more than a year ago. they have shown understanding of what items are and how they behave and interact. I know it’s popular here to call it a parrot or whatever but most people don’t have access to the high level stuff and most seem afraid/snobby/parroting things themselves.

agissilver,

Virtual screening libraries are usually some form of expanded chemical space meaning they contain real and previously unknown compounds. The article says the 12 million compounds screened virtually were commercially available, but I couldn’t see enough of the nature paper to verify. It could be that the virtual screening set was acquired from a private company, but that doesn’t necessarily mean all the compounds are known.

HubertManne, in Scientists discover first new antibiotics in over 60 years using AI
@HubertManne@kbin.social avatar

ai is finding antibiotics for diseases ai hasn't even created yet (I kid, I kid)

Ibex0,

🫠

ianovic69, in Scientists discover first new antibiotics in over 60 years using AI
@ianovic69@feddit.uk avatar

Well this is uplifting. I for one choose to view the future of ai in a more “Iain M Banks Culture novel” way.

It’s people that ruin things. But it doesn’t have to be that way.

Nudding,

Think of how many more species we can drive to extinction now!

flambonkscious,

Signing up for contact division now, I can’t wait

Kata1yst,
@Kata1yst@kbin.social avatar

Me too, but I don't like my odds.

deweydecibel,

But it’s going to be. Until we do something to stop them, it’s absolutely going to be that way. There’s no serious view of human history that will tell you anything different.

We can’t just sit here and marvel at technology without acknowledging who controls it, who uses it, and what they’re going to use it for. Without people, AI is just a bunch of code sitting there waiting for input.

xkforce, in Scientists discover first new antibiotics in over 60 years using AI

The article (and what I can access of the paper it is based on) doesn’t really give any details as to what this class is, how it works etc. All the interesting parts about this aren’t mentioned.

krellor,

It sounds like they trained a classification model using 39,000 molecules with known reactivity to MRSA. The molecules are vectorized text representations of the structures. Once trained, they can run arbitrary molecules through the model and see which ones are predicted to have antibiotic properties, or at least MRSA reactivity.

They likely fed in molecules from families of structures that seem likely to contain an antibiotic but are too numerous to manually test them all. They get a prediction of which ones are likely to have the properties they want, and then start the slow process of creating and testing the molecules in the lab.

xkforce,

I get what they did (its been something a lot of groups have been wanting to do for years) but I am curious what molecule specifically they found that worked especially well. i.e What does this thing look like? What is the new antibiotic’s mechanism of action? None of those latter details are discussed. Its something we can only guess at.

krellor,

It sounds like they are moving forward with clinical testing in partnership with a bio company, so I'm sure they withheld the information anticipating a patent. The results of this paper was the validation of the explainable AI model which identified candidate classes of compounds.

TonyTonyChopper,
@TonyTonyChopper@mander.xyz avatar

Wow I love science. I love that someone owns the exclusive rights to sell new drugs at whatever price they want

PersonalDevKit,

capitalism, isn’t the free market so hopeful for the masses?

Aleric, (edited )

That’s not science, that’s capitalism. Don’t forget that Dr. Jonas Salk refused to patent the polio vaccine, which is estimated to have a total value of over seven billion US dollars. Dr. Salk has always been a hero of mine.

Shit bag lawyers from the National Foundation for Infantile Paralysis later tried to see if they could patent it for themselves and luckily couldn’t. That’s capitalism for you. Fuck these guys.

scarabic,

This is why we need single payer healthcare. Let them charge whatever they want, but if there is only one buyer, that buyer can also pay whatever they want.

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